Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820635.1_cds_XP_016500479.1_14301
CDS Infomation

[gene=LOC107818914] [db_xref=GeneID:107818914] [protein=protein misato homolog 1-like] [protein_id=XP_016500479.1] [location=complement(join(80813..81255,81951..82070,82158..82400,83241..83490,84441..84804,85169..85244,86504..86549,86643..86744,87624..87695))] [gbkey=CDS]
Sequence

ATGAGAGAAATCGTAACTGTTCAAGTGGGGAATTATGCCAACTTTATTGGCTCTCACTTC
TGGAACTTCCAGGATGAATTACTTGGATTGGCTGAAAGCCCTGAGAGTGATCAAGTATTC
ATAAATCATGGTCTTGATATGGACGTGTTGTATCGTACTGGTGAAACTCAGCAGGGCGTC
CTTACATACACCCCTCGAATGGTCTCAGTAAATTTTCAAGGGTCTCTTGGATCTTTGAGT
TCACGTGGATCCTTGTACAGTCAAATCCCAGCCAAAAGCTTGGATGTTATGACATGGAAG
GGTAGAGTCGCAACTCATGCATCTGAACCTTTAAGAAGGAATCTCTTCTTGCAAAGTTTA
AGTGAGGAAGAACAGGAGAGCATGGACAAAGCCGCTTTAGACAATAGGAACGGCAGTTCT
CAGGGTGAAATTCAAGATAAGGATATCGTTGAATGTTTGGAAAGTGATGTTCAATATTGG
ACAGACTTTTCAAAAGTGCACTATCATCCACAGAGTTTGTATGAATTAAGTGGATTATGG
GTAGAGATTCAGGATTTCGATAATTATGCACTCGGGAAGGATGCATTTTGTGGACATCAA
CACGGTGAAGAAATAGATGATAGGCTTCGTTTCTTCATCGAAGAATGTGATCATATTCAG
GGGATACAATGCGTTGTTGATGACTCTGGAGGGTTTTCTGGTGTAGCTGCAGCATTTCTG
GAGAACATTGCAGATGAGTACCCAAACGTCCCAGTTTTACTATATAATGCGCGTAATCCT
AGTTTGAACATGGATTCCAAAGGCCGCAAGCAAGCTATCTCGCGTAATCTTCACGATGCA
GTCTCATTTTCAAGGCTATCAGAGTTGTGTAAATTGATTATCCCTGTTGGTCTGCCCTCC
TTGAGTGGAAGTAGAGCTTCCCAGTTTCTCTGCATTAAAGACGAAAAGCCTTACCACTCC
AGTGCAGTGTATGCGTCTGCTATGCACTCGTTTAGTCTTCCTTTTAGGATGAAACAATCT
GGGCCTTCTGCCGAATCAATCTGTACATCTGGTGCTCTAGATATGTACGGAATTGTACAA
ATGCTAGCTGGCCAAATGAGGCAGAACATGGTAACTGTATTGGATTTTGCCATGCCAGCA
CCTTCTTTAAGTGTAAACCAGGCTCAGCAGTCCTTACTCCGAAGTTTGCAGCCCTTGACT
CCAGATGTAGCAGAAGATGTTGAAGATTTACATGCAGTGGAAACAATGAACATTCATGGA
GCAGTTACATCTGGAAACCAAAGGGCCTCAATTTATGAAGTTAAGGATGCAGTTCAGGCT
GCATATGATAGTTCAATGACGATGCCCAAATTCTCACACCTATCAGTTGCTACTTGTCCT
CTTCCGATACCCTTGCCTTTCCCTTCGATCTTTGGCAATATGGTTGGCCAACATGGTGAG
CTATTGGAGACCCCAATTTCAGGTTCCTCATCTAGGGGATCTCTTGAAGTCCAATCCATT
CCTATGGTAACAAGATTACGTTCAAGCACTGCTGTTTTGCCCTTTTTGGAAAGTAAACTT
GGAAACCTTCATAAGTTTGGTATTGACCGAGGAGCCCTTGGGGCGCCATTGCTCCAAAGT
TGGGGTTTTGGAAAAGATGAAGTGGAAGACATGGGAGAGACGCTGTCTAAGTTGGTAGTG
ACACTGAAGCCTCAATATTCCTCTGATTCAGATTGA

Peptide Sequence

PEP ID

XP_016500479.1
PEP Infomation

PREDICTED: protein misato homolog 1-like [Nicotiana tabacum]
Sequence

MREIVTVQVGNYANFIGSHFWNFQDELLGLAESPESDQVFINHGLDMDVLYRTGETQQGV
LTYTPRMVSVNFQGSLGSLSSRGSLYSQIPAKSLDVMTWKGRVATHASEPLRRNLFLQSL
SEEEQESMDKAALDNRNGSSQGEIQDKDIVECLESDVQYWTDFSKVHYHPQSLYELSGLW
VEIQDFDNYALGKDAFCGHQHGEEIDDRLRFFIEECDHIQGIQCVVDDSGGFSGVAAAFL
ENIADEYPNVPVLLYNARNPSLNMDSKGRKQAISRNLHDAVSFSRLSELCKLIIPVGLPS
LSGSRASQFLCIKDEKPYHSSAVYASAMHSFSLPFRMKQSGPSAESICTSGALDMYGIVQ
MLAGQMRQNMVTVLDFAMPAPSLSVNQAQQSLLRSLQPLTPDVAEDVEDLHAVETMNIHG
AVTSGNQRASIYEVKDAVQAAYDSSMTMPKFSHLSVATCPLPIPLPFPSIFGNMVGQHGE
LLETPISGSSSRGSLEVQSIPMVTRLRSSTAVLPFLESKLGNLHKFGIDRGALGAPLLQS
WGFGKDEVEDMGETLSKLVVTLKPQYSSDSD

Transcript Sequence

Gene sequence data has not been registered.